Meet the instructors
Ibrahim Abbasi
Ibrahim Abbasi Ph.D. is an assistant
professor at the Department of Biology and Biotechnology at Al-Quds
university in Jerusalem. Dr. Abbasi received his M.Sc. in
Parasitology from Yarmouk University in Jordan and his PhD from The
Hebrew University, Hadassah Medical School in Jerusalem. He has been
interested in diagnostic work of various parasites including Schistosoma
and Leishmania.
PublicationsSebastian Baumgarten
Sebasitian is a post-doctoral researcher in Artur Scherf's Lab, Biology of Host-Parasite Interactions Unit, Institut Pasteur, France. Sebastian's work focuses on the role of RNA modifications in post-transcriptional gene regulation of the human malaria parasite, Plasmodium falciparum. Sebastian received his Ph.D. from the Red Sea Research Center, King Abdullah University of Science and Technology, Saudi Arabia where he studied the genome of Aiptasia and the role of microRNAs in cnidarian-dinoflagellate endosymbiosis under the supervision of Dr. Christian R. Voolstra.
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Jon Boyle
Dr. Boyle got his Ph.D. in 2003 with Dr. Timothy Yoshino at the University of Wisconsin-Madison, performed his Postdoctoral work with Dr. John Boothroyd at Stanford University, and joined the department in 2008. Currently he is an Associate Professor of Host-pathogen interaction at the University of Pittsburgh in Pittsburgh, Pennsylvania, USA.
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Hugo Bisio
Hugo Bisio Ph. D. is a post-doctoral fellow in the laboratory of Dominque Soldati-Favre.
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Jessica Bryant
Jessica Bryant Ph. D. is a post-doctoral fellow in the Biology of Host-Parasite Interactions (BIHP) unit at the Institute Pasteur, Paris, France. At BHIP Jessica works under the direction of Artur Scherf where she is interested in understanding epigenomic regulation in Plasmodium parasites.
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Richard
Burchmore
In addition to heading Proteomics at Glasgow Polyomics, Richard is a Senior Lecturer in the Institute of Infection, Inflammation and Immunity at the College of Medical, Veterinary and Life Sciences. Richard obtained his PhD from the University of London in 1993 and completed postdoctoral fellowships in Oregon, London and Glasgow, becoming a PI at the University of Glasgow in 2003. Richard has longstanding interests in host–pathogen interactions. Over the past decade he has focussed on the application of proteomics to understand the response of pathogens to challenges presented by drugs and hosts. These approaches can readily be brought to bear on a broad range of biological questions and he is consequently involved in collaborative research in areas as diverse as food security, forensics and ecology.
Much of the work in the Burchmore group is focused on Leishmania, a
protozoan parasite of global medical importance. He has collaborations
with scientists in Leishmania endemic areas in central America and the
middle east, as well as research collaborations with a number of
laboratories in Europe and north America.In addition to heading Proteomics at Glasgow Polyomics, Richard is a Senior Lecturer in the Institute of Infection, Inflammation and Immunity at the College of Medical, Veterinary and Life Sciences. Richard obtained his PhD from the University of London in 1993 and completed postdoctoral fellowships in Oregon, London and Glasgow, becoming a PI at the University of Glasgow in 2003. Richard has longstanding interests in host–pathogen interactions. Over the past decade he has focussed on the application of proteomics to understand the response of pathogens to challenges presented by drugs and hosts. These approaches can readily be brought to bear on a broad range of biological questions and he is consequently involved in collaborative research in areas as diverse as food security, forensics and ecology.
Richard is on the editorial boards of Expert Reviews in Proteomics and Expert Reviews in Anti-Infective Therapy and is a member of the Board of Directors for the British Society for Proteomic Research.
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Jeremy Burrows
Jeremy is Vice President and Head of Drug Discovery at Medicines for Malaria Venture (MMV). At MMV, Jeremy leads the drug discovery team which is responsible for discovering and delivering the next generation of antimalarial compounds for preclinical and clinical evaluation. We are only able to do this because of the amazing work of my Discovery colleagues at MMV, and the tremendous collaborations that we have with over 35 partners globally. Key aspects of my role are drug discovery and medicinal chemistry input into projects, articulating the antimalarial drug discovery strategy and raising the profile of MMV externally to help raise funds for our critical work.
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James Collins
James (Jim) Collins, Ph.D., is
Assistant Professor in the Pharmacology Department at UT Southwestern
Medical Campus. Jim Collins received his BS in Biology from Southeast
Missouri State University (2003) and PhD from Washington University in
St. Louis (2008). He did postdoctoral work with Phillip Newmark
(Howard Hughes Medical Institute) at the University of Illinois at
Urbana-Champaign. His research focuses on the basic biology parasitic
flatworms called schistosomes. These parasites infect more than 200
million of the world's poorest people, causing morbidity that rivals
global killers including Malaria and TB. Despite their devastating
global impact, only a single drug is available to treat schistosome
infection. As a postdoc Dr. Collins developed new functional genomic
tools to study these worms and using these tools discovered a novel
population of stem cells that are likely key to parasite survival
inside their human host. By studying these stem cells, and applying
large-scale functional genomic approaches, his work aims to develop
new therapeutic avenues to combat these devastating parasites.
PublicationsKirk Deitsch
Kirk W Deitsch Ph.D. is a professor of
Microbiology and Immunology at the department of Microbiology and
Immunology, Weill Cornell Medical College, New York, USA. Dr.
Deitsch received his Ph.D. from the University of Michigan. His
research focuses on how malaria parasites regulate expression of the
var gene family and how they generate diversity within these antigen
encoding genes. Parasites isolated from different geographic
regions typically have completely different var gene repertoires, thus
preventing their human hosts from generating an immune response that
can recognize all parasites. Thus var genes appear to be diversifying
much more rapidly than the rest of the genome. This process of
diversification involves frequent gene conversion events that are
initiated by DNA double strand breaks.
Publications Freddy
Frischknecht
Freddy is Professor for Integrative Parasitology at the University of Heidelberg Medical School. Freddy is mainly interested in how malaria parasites move, especially the ones injected by the mosquito into the skin of the host. These sporozoites move at very high speed through the dermis and search for blood vessels that they need to enter. In the lab we use a number of different imaging and biophysical technologies along with classic molecular genetics to understand more about sporozoite biology, from parasite formation to motility and differentiation into red blood cell infecting parasites
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Freddy is Professor for Integrative Parasitology at the University of Heidelberg Medical School. Freddy is mainly interested in how malaria parasites move, especially the ones injected by the mosquito into the skin of the host. These sporozoites move at very high speed through the dermis and search for blood vessels that they need to enter. In the lab we use a number of different imaging and biophysical technologies along with classic molecular genetics to understand more about sporozoite biology, from parasite formation to motility and differentiation into red blood cell infecting parasites
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Mehdi Ghorbal
Mehdi Ghorbal completed his PhD at
Institute Pasteur in France, where he focused on biochemical,
functional and structural characterizing of a DNA-recombinase of Plasmodium
and its role in genetic diversification. In 2012, he started a postdoc
to explore the DNA-repair mechanisms and gene regulation in Plasmodium
falciparum. During his postdoc, he participated in implementing
the genome-editing tool CRISPR-Cas9 for P. falciparum. He is
currently involved in scaling up the CRISPR-Cas9 technology for Plasmodium.
Alex
Grinberg
Alex Grinberg DVM, Ph.D. is a senior lecturer in microbiology and public health at the School of Veterinary Science, Massey University, New Zealand. His research and expertise focuses on diagnostic bacteriology and molecular epidemiology of infectious agents. Significant areas of research include Cryptosporidium and cryptosporidiosis, Staphylococcus aureus and antimicrobial drug resistance.
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Alex Grinberg DVM, Ph.D. is a senior lecturer in microbiology and public health at the School of Veterinary Science, Massey University, New Zealand. His research and expertise focuses on diagnostic bacteriology and molecular epidemiology of infectious agents. Significant areas of research include Cryptosporidium and cryptosporidiosis, Staphylococcus aureus and antimicrobial drug resistance.
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Gerry
Graham
Gerry is Professor of Molecular and Structural Immunology at the Institute of infection, immunity and inflamation. His lab has had a long-standing standing interest in chemokines and their receptors and have been working in this field for 18 years. Currently, the lab has a number of projects that relate to various aspects of chemokine and chemokine receptor function: Studies into the biological function of the D6-chemokine decoy receptor.
Gerry is Professor of Molecular and Structural Immunology at the Institute of infection, immunity and inflamation. His lab has had a long-standing standing interest in chemokines and their receptors and have been working in this field for 18 years. Currently, the lab has a number of projects that relate to various aspects of chemokine and chemokine receptor function: Studies into the biological function of the D6-chemokine decoy receptor.
Omar S. Harb
Omar Harb Ph.D. is Director of
Scientific Outreach and Education at the Eukaryotic Pathogen
Database Bioinformatic Resource Center. Dr. Harb received his
Ph.D. from the University of Kentucky and postdoctoral research
training in cellular and molecular parasitology with Professor David
Roos at the University of Pennsylvania. Dr. Harb has had a
long standing interest in education and issues of social
justice. He also serves as chair of the board of Al-Bustan
Seeds of Culture in Philadelphia, USA and is a founding member
of the Middle East Biology
of Parasitism initiative.
PublicationsPhilipp is a group leader at the
Institute for Veterinary pathology at the University of Bern in Bern,
Switzerland. His groups is interested in the molecular
mechanisms as to how apicomplexan parasites interact with their
host cells and cause disease. The main organisms utilized in the
lab are the cattle pathogens Theileria annulata and Theileria
parva, which both have a substantial socio-economic impact, and
the zoonotic parasite Cryptosporidium parvum. Cryptosporidium
parasites are the leading cause of diarrhoea in calves, one of
the most important diseases in cattle. Cryptosporidium
parasites are also leading diarrheal pathogens in humans, resulting in
substantial child mortality globally.
Charles Jaffe
Charles Jaffe Ph.D. is the Michael
and Penny Feiwel Professorial Chair in Dermatology at Hebrew
University of Jerusalem. Dr. Jaffe received his Ph.D. from the
Weizmann Institute of Science. His research focuses on the
biochemistry and immunology of the parasitic protozoa Leishmania,
the development of vaccines and diagnostic test for visceral
leishmaniasis and the role of protein kinases in development of the
parasite.
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Poppy Lamberton
Poppy Lamberton Ph.D. is a senior
lecturer in Parasitology at the University of Glasgow and an
honorary senior lecturer at the Faculty of Medicine, School of
Public Health, Imperial College, London, UK. Dr. Lamberton
received her Ph.D. from the Department of Infectious Disease
Epidemiology, Imperial College, London, UK. Her current
research focuses on utilising field epidemiological data, laboratory
experiments and population genetics to understand population
structure, transmission dynamics and effects of long term mass drug
administration programmes on neglected tropical diseases (NTDs) such
as schistosomiasis, soil-transmitted helminths, opisthorchiasis and
onchocerciasis.
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Gaëlle Lentini
Gaëlle
is currently a post-doc in Dominique Soldati’s lab studying cell
biology of Toxoplasma gondii. She got into parasitology
quite early during my Bachelor studies. During her PhD at the
University of Montpellier (France), she studied the way T.
gondii inject its rhoptry proteins into the host cell, an
essential step in the infection process as well as the peculiar
pellicle organization of this parasite. She then moved to USA
where she joined the Harvard School of Public Health (Boston) to
learn how to genetically manipulate Trypanosoma cruzi and
mammalian host cell to tackle the molecular basis of host-T.
cruzi interactions. Gaëlle
is now a post-doc at the University of Geneva (Switzerland),
coming back to her first preferred parasite T. gondii where
is is focusing on the complex molecular and cellular
cross-talk occurring between intracellular parasites and their
host cells in the context of acute and chronic infections by both
T. gondii and T. cruzi.
Shula Michaeli Ph.D. is a professor
at Bar-Ilan University and dean of at the Mina and Everard Goodman
Faculty of Life Sciences. She earned her Ph.D. in microbiology
from Tel-Aviv University, Israel. Dr. Michaeli's research
group focuses on RNA molecules that participate in RNA
trans-splicing unique to these parasites. They are interested in the
structure and function of novel anti-sense non-coding RNAs, as well
as the mechanism behind a novel RNAi silencing event discovered in
their laboratory, snoRNAi, which silences nucleolar RNAs.
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Budhadiyta (Adi) Mukherjee
Adi got his Ph.D. from the Department of Infectious disease and Immunology, Indian Institute of Chemical Biology (IICB), India, under supervision of Dr. Syamal Roy where he studied the differential modulation of host cells by antimony sensitive and antimony resistant clinical Leishmania donovani isolates. From 2015-2017 Adi was a EMBO post-doctoral fellow in the laboratory of Dr. Dominique Soldati-Favre in Geneva, Switzerland where he continues to work on host parasite interactons.
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Mattie
PawlowicPublications
Budhadiyta (Adi) Mukherjee
Adi got his Ph.D. from the Department of Infectious disease and Immunology, Indian Institute of Chemical Biology (IICB), India, under supervision of Dr. Syamal Roy where he studied the differential modulation of host cells by antimony sensitive and antimony resistant clinical Leishmania donovani isolates. From 2015-2017 Adi was a EMBO post-doctoral fellow in the laboratory of Dr. Dominique Soldati-Favre in Geneva, Switzerland where he continues to work on host parasite interactons.
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Mattie Pawlowic, Ph.D. is a group
leader in the Division of Biological Chemistry and Drug Discovery
(BCDD) and the Wellcome Centre for Anti-Infectives Research (WCAIR) at
the University of Dundee, Dundee, Scotland. Her lab focuses on
understanding the biology and biochemistry of Cryptosporidium
with the goal of developing new anti-parasitic drugs. Mattie
previously studied the parasite Leishmania during her
undergraduate and graduate years at Texas Tech University, and
subsequently was a postdoctoral researcher in the laboratory of Boris
Striepen at the University of Georgia. During her time in the Striepen
lab, Dr. Pawlowic developed genetic tools for studying Cryptosporidium.
Isabel Roditi
Isabel Roditi Ph.D. is codirector of
the Institute of Cell Biology at the University of Bern in
Switzerland. She received her PhD from the University of Cambridge,
Wolfson College. She did postdoctoral work with the Medical
Research Council in Cambridge and later at the Institute for Genetics
and Toxicology at Karlsruhe University in Germany. In 1993, she
received the Helmut Horten Förderpreis, and in 2001, she received the
Cloetta Prize; in 2001, she was elected a member of the Swiss Academy
of Medical Sciences. From 2008 to 2010 she was president of the Swiss
National Science Foundation Committee for Career Development.
She was an HHMI international research scholar from 2005 to 2010. Dr.
Roditi has also been instrumental in facilitating the MeBOP course and
serving as the local organizer.
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Barrie Rooney
Barrie Rooney Ph.D. is currnetly the CEO of TROZON X17, a charity company designing diagnostics for Tropical Zone Diseases which are simple to use in any environment. Previously she was based at the School of Biosciences at the University of Kent, UK where she worked in the group of Professor Mark Smales. For many years Dr. Rooney's has been involved with Médecins Sans Frontières (MSF) and other teams to developed a simple diagnosis method to identify sleeping sickness more easily, safely and cheaply than ever before. For her work, Dr. Rooney was the recipient of the 2016 Biotechnology and Biological Sciences Research Council (BBSRC) Social Innovator of the Year award.
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David S. Roos
David S. Roos, Ph.D. is the E. Otis Kendall Professor of Biology at the University of Pennsylvania, Philadelphia, USA. Dr. Roos earned his undergraduate degree at Harvard College and his a Ph.D. at The Rockefeller University. Work by Dr. Roos' group seeks to integrate diverse disciplines, from molecular cell biology and pharmacology, to computer science and international public health. Current interests focus on protozoan parasites, including Toxoplasma and Plasmodium. Research in the Roos laboratory has yielded genetic tools for the dissection of parasite pathogenesis and drug resistance mechanisms, new insights into the evolution and function of subcellular organelles, and computational tools including databases making genomic-scale datasets accessible to scientists worldwide.
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Lilach Sheiner
Lilach Sheiner Ph.D. is a research fellow at the University of Glasgow, UK and a PI at the Wellcome Trust Centre for Molecular Parasitology. She received her Ph.D. from the University of Geneva under the supervision of Dr. Dominique Soldati-Favre and completed her post-doctoral training at the Center of Tropical and Emerging Global Diseases, University of Georgia, USA. Research in the Sheiner lab centers around fundamental cellular biology, focusing on eukaryotic parasites, mainly using Toxoplasma gondii as a model organism. She put together one of the most widely used genetic manipulation systems for conditional gene depletion in Toxoplasma and made substantial contribution to the understanding of apicomplexan plastid and mitochondrial biology. Dr. Sheiner is a passionate activist for peace and equality and is a founding member of the Middle East Biology of Parasitism initiative.
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Dominique Soldati-Favre
Dominique Soldati-Favre obtained her PhD degree at the University of Zurich in 1990. She was then a postdoctoral Fellow at Stanford University, Assistant Professor at the University of Heidelberg and Reader at Imperial College London. In Geneva, she was appointed Associate Professor in 2004 at the Department of Microbiology and Molecular Medicine, then full Professor in 2010. Dominique Soldati-Favre is Vice-Dean of the Faculty since 2011.
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Chris Tonkin
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Barrie Rooney
Barrie Rooney Ph.D. is currnetly the CEO of TROZON X17, a charity company designing diagnostics for Tropical Zone Diseases which are simple to use in any environment. Previously she was based at the School of Biosciences at the University of Kent, UK where she worked in the group of Professor Mark Smales. For many years Dr. Rooney's has been involved with Médecins Sans Frontières (MSF) and other teams to developed a simple diagnosis method to identify sleeping sickness more easily, safely and cheaply than ever before. For her work, Dr. Rooney was the recipient of the 2016 Biotechnology and Biological Sciences Research Council (BBSRC) Social Innovator of the Year award.
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David S. Roos
David S. Roos, Ph.D. is the E. Otis Kendall Professor of Biology at the University of Pennsylvania, Philadelphia, USA. Dr. Roos earned his undergraduate degree at Harvard College and his a Ph.D. at The Rockefeller University. Work by Dr. Roos' group seeks to integrate diverse disciplines, from molecular cell biology and pharmacology, to computer science and international public health. Current interests focus on protozoan parasites, including Toxoplasma and Plasmodium. Research in the Roos laboratory has yielded genetic tools for the dissection of parasite pathogenesis and drug resistance mechanisms, new insights into the evolution and function of subcellular organelles, and computational tools including databases making genomic-scale datasets accessible to scientists worldwide.
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Lilach Sheiner
Lilach Sheiner Ph.D. is a research fellow at the University of Glasgow, UK and a PI at the Wellcome Trust Centre for Molecular Parasitology. She received her Ph.D. from the University of Geneva under the supervision of Dr. Dominique Soldati-Favre and completed her post-doctoral training at the Center of Tropical and Emerging Global Diseases, University of Georgia, USA. Research in the Sheiner lab centers around fundamental cellular biology, focusing on eukaryotic parasites, mainly using Toxoplasma gondii as a model organism. She put together one of the most widely used genetic manipulation systems for conditional gene depletion in Toxoplasma and made substantial contribution to the understanding of apicomplexan plastid and mitochondrial biology. Dr. Sheiner is a passionate activist for peace and equality and is a founding member of the Middle East Biology of Parasitism initiative.
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Dominique Soldati-Favre
Dominique Soldati-Favre obtained her PhD degree at the University of Zurich in 1990. She was then a postdoctoral Fellow at Stanford University, Assistant Professor at the University of Heidelberg and Reader at Imperial College London. In Geneva, she was appointed Associate Professor in 2004 at the Department of Microbiology and Molecular Medicine, then full Professor in 2010. Dominique Soldati-Favre is Vice-Dean of the Faculty since 2011.
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Chris Tonkin
Chris is
interested understanding the molecular pathways that are responsible
for causing disease in apicomplexan parasites. In particular, he
aims to understand how parasites are able to sense their environment
and regulate infectivity as well as modify their environment for
their own benefit. Chris completed his PhD at The University of
Melbourne on the relict plastid of apicomplexan parasites and then
undertook a postdoc investigating the molecular basis of antigenic
variation in malaria parasites. He now heads up a laboratory at The
Walter and Eliza Hall Institute of Medical Research in Melbourne
Australia, where his group primarily uses Toxoplasma
to understand fundamental principles driving infectivity and
persistence and how they relate to disease of apicomplexan parasites
as a whole.
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Karin Troell
Karin Troell, Ph.D. is a researcher at the National Veterinary Institute in Uppsala, Sweden. Karin's research looks at food and waterborne protozoa (Giardia lamblia and Cryptosporidium species). She develops diagnostic tools for the molecular identification and typing of parasites for genomic and transcriptomic analysis.
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Dr. Akhil B. Vaidya is a Professor of
Microbiology and Immunology and the Director of the Center for
Molecular Parasitology within the Institute for Molecular Medicine and
Infectious Disease at Drexel University College of Medicine. He is a
molecular parasitologist who has carried out seminal research on
mitochondrial physiology and bioenergetics in malaria parasites as
well as on mechanisms of antimalarial drug action and
resistance. Dr. Vaidya's research interests also include
development of new antimalarial drugs, parasite genomics, and global
health challenges. He has served and continues to serve on
numerous review panels at NIH, NSF, CDC and Veterans Administration.
In addition to his research activities, Dr. Vaidya continues to
participate heavily in teaching activities in both the medical and
graduate student programs.